You are here: Home >

phd

Young CRCNPB scientist recognised in national award

Media Release: 28 November 2008

A PhD student's commitment to plant biosecurity research has won the 2009 Northern Territory Young Australian of the Year Award.

The fastest and smuttiest CRC PhD project…

Alistair McTaggart's PhD project has completely revised the taxonomy of three large genera of smut fungi.

Alistair McTaggart accepts his award for best student poster at the 2009 Science Exchange

Plant research to protect tomato production

CRC PhD candidate Sharon van Brunschot is researching new diagnostic methods into tomato yellow leaf curl.

Tomato plant with symptoms of Tomato yellow leaf curl virus

Revision of the Genus Epiphyas - the light-brown apple moth in context (WA focus)

Student Project Reference: 
Publication Type  Presentation
Year of Publication  2008
Authors  Hitchcock, B.
Meeting Name  

Meet the Scientist - Neale Junction Nature Reserve Expedition

Meeting Start Date  

4 October 2008

Meeting Location  

Dunnart Camp, Neale Junction Nature Reserve

2008 PhD workshop

Rottnest IslandThe annual PhD student workshop was held on the 16 and 17 September at Rottnest Island.

 

Twenty four of the CRC's PhD students made the journey to Rottnest Island to enjoy two days sitting indoors and working hard while the sun shone outside.

 

Migration of Lettuce Aphid in Australia

Currant-Lettuce aphid (CLA), Nasonovia ribis-nigri, migrated from New Zealand to Tasmania on low-level jet streams in January 2004 and rapidly spread throughout Australia. Like many small winged insects, aphids migrate predominantly via wind and human activity. The distance of their dispersal is influenced by many factors including temperature and weather events.

 

This project developed an understanding of how biotic factors affect the dispersal of rain-splashed asexual spores (conidia) and wind-borne sexual spores (ascospores).

What is the biosecurity problem?

Once an exotic fungal pest has been introduced to a new area (such as via seed or soil) establishment and further spread are influenced largely by the spore dispersal pattern. Long-distance dispersal via wind-borne spores is a common feature of fungal pests, as is short-distance dispersal via rain-splash of spores. Studies that identify the link between environmental factors and spore dispersal can assist in assessing the potential disease risk for agrogeographical zones. Ascochyta species of pulse crops are already within Australia and have rain-splashed asexual spores (conidia) and wind-borne sexual spores (ascospores). These fungi provide an opportunity to study the relationship between the environment and spore dispersal, and to develop risk assessment strategies for exotic pests with similar spore dispersal patterns.

The main outputs of this project were to:

  • identify key factors influencing the short-distance (rain-splashed) and long-distance (wind-borne) distribution of spores of exotic foliar pests of annual field crops, using Ascochyta blight as a model.
  • determine effect of rainfall, temperature, wind, landscape and host susceptibility on spread of conidia and disease from artificially-inoculated plants placed in crop
  • Use controlled conditions to determine the effect of rain and wind on spore dispersal for pests that spread via rain-splash or wind, and
  • identify potential disease risk for different agroecological zones.

Who will be the end-users of this research?

This project produced a new PhD graduate trained in Plant Pathology, with specific skills in plant disease epidemiology. The graduate was available for immediate employment within the Biosecurity industry, increasing Australia's capability to respond to disease outbreaks

 

STUDENT


Mr Steven Coventry
Student CRC60003: Ascochyta Wind Tunnel - PhD

steven.coventry@adelaide.edu.au
Phone: 08 8303 7259
Fax: 08 8303 7109

Read More

PROJECT DETAILS

Status
Complete
Supervisor
Dr Eileen Scott (UOA) and Dr Jenny Davidson (SARDI)
Supervising Institution
La Trobe University
Term
March 2006 - March 2009

LOCATION

The main goal of this project was to undertake research that will develop technically sound sample/survey methodologies and systems to enhance the ability to capture a wide range of plant health information in an accurate and cost-effective manner both domestically and internationally.

What is the biosecurity problem?

I aimed to create the necessary tools to significantly reduce the amount of human intervention, as required in present systems. The computational techniques will be required to recognise and identified EPPs in real-time on-board automatic insect traps. The use of imaging technologies based upon hyperspectral and UV ranges to develop a statistical and computational framework for the classification and identification of selected EPPs are challenges.

The main outputs of this project were to:

  1. devlop new, better understanding of shape/image descriptors suitable for spectral imagery specially designed for biosecurity surveillance systems
  2. create a set of kernel-based, statistical methods that can be used to perform classification of emergency plant pests making use of the descriptors developed in item 1, and
  3. develop a framework that will permit the extension of the classification methods developed in item 2 to include domain knowledge. This will involve the development of semi-supervised pattern recognition and interactive computer vision methods based upon statistics that are scalable and capable of real-time analysis.

Who are the end-users of this research?

Automatic and continuous monitoring capabilities of ‘smart traps' have a high potential for commercialisation, both nationally and internationally. Such technology will most likely be adopted by state agencies and plant-based industries involved in early warning networks for emergency plant pests to increase efficiency and reduce cost of monitoring early warning insect traps. Outcomes from this project may also be applicable to a range of biosecurity issues such as semi-automated surveillance systems in quarantine facilities, index databases, building of libraries for future reference, etc.

STUDENT


Ms Pattaraporn Khuwuthyakorn
Student CRC60075: NICTA Smart Trap - PhD

U4420081@anu.edu.au

Read More

PROJECT DETAILS

Status
Complete
Supervisor
Dr Antonio Robles-Kelly and Dr Jun Zhou (ANU) and Dr Louise Morin (CSIRO Entomology)
Supervising Institution
Australian National University
Term
March 2008 – March 2011

LOCATION